Id Trinity | TRINITY_DN24984_c0_g1_i1 |
---|---|
Name Transcript | Ll_transcript_347208 |
Sequence | TTGATTTTGGTCAAAAAGAAGGATGGTGGATGGCGTTTCTGTGTGGATTACCGAGCTCTCAACAACATTACGGTACCCAACAAATTCCCAATTCCTATAA TCGAGTTGTTAGATGAGTTGGGCGGGGCAACACTTTTTTCGAAATTGGACCTCAAATCGGGGTACTATCAGATTCGGATGAAGGAAGAAGATATTCCAAA AACGGCTTTCCGGACTCGTGAAGGTCATTATGAGTATATGGTGATGTCATTTGGGCTTACTAACGCACCATCGACTTTTCAAGCATTGATGAATGATGTT TTTCGGCCATTTTTGAGAAAGTTCGTGTTAGTCTTTTTTGATGACATCTTGGTATATAGTCATGACATGGCAGCTCATTGTACTCACTTGGAAAGGGTGT TCCGGATTCTATGGGAGAATCAGCTATGGGTTAATTTTAAAAAATGTTGTTTTGGGGCTGGTAAGTTGGAGTACTTGGGTCATATCATATCCGGG BLAST |
Tissue | pods |
Gene name | LI_gene_123864; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_347208
Blastp | Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 43.45% of identity |
---|---|
Blastx | Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 43.45% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019459981.1) |
Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |